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  1. Cleanup of MercuryDPM/MercuryPBM

  2. Check paraview plugins and the way we use paraview. Standardise paraview usage

  3. ON-DEM file format

  4. clean up computeOneTimeStep().

  5. Group classes: https://chatgpt.com/c/67458abe-819c-8010-9f8b-717d4e1ffeff Doxygen provides for this: @ingroup @defgroup